Samples N migration histories under the DTA model deme fixed at all leaves using belief propagation
Usage
DTA_sampling(strphylo, fit_mig_mat, N = 1, parallel = FALSE, mc.cores = NA)
Arguments
- strphylo
Dated structured phylogenetic tree
- fit_mig_mat
Forwards-in-time migration matrix for the phylogeny
- N
Number of migration histories to sample
- parallel
Logical, whether or not to generate proposals in parallel
- mc.cores
(optional) If parallel is TRUE, number of cores to parallelise over
Value
List of proposed DTA migration histories with the same leaves as input ED